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IDSACE_1108 TypeCDS
From1231104 nt length477
To1231580 aa length158
GenesmpB pI10.86
DefinitionSsrA-binding protein M.W (Da)18008
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5107 putative small protein B2008.0e-53
coelSCO2966 smpB small protein B homologue1822.0e-47
sgrSGR_4561 putative small protein B2008.0e-53
scabSCAB55751 putative small protein B1978.0e-52
saceSCAB55751 putative small protein B1978.0e-52
nfarnfa44800 putative small protein B2082.0e-55

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SmpB1SmpB protein9-72100.73e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946561.1 SsrA-binding protein [Saccharopolyspora erythraea] >sp 8182.8e-111
WP_093262246.1 SsrA-binding protein SmpB [Saccharopolyspora shandongensis] ... 7332.4e-98
WP_010693918.1 SsrA-binding protein SmpB [Saccharopolyspora spinosa] 7323.3e-98
WP_093153218.1 MULTISPECIES: SsrA-binding protein SmpB [Saccharopolyspora] ... 7236.7e-97
WP_093414952.1 SsrA-binding protein SmpB [Saccharopolyspora flava] >emb 7151.4e-95
WP_029722414.1 SsrA-binding protein SmpB [Saccharopolyspora rectivirgula] >... 6985.1e-93
WP_018684127.1 SsrA-binding protein SmpB [Actinokineospora enzanensis] 6776.8e-90
WP_091373415.1 SsrA-binding protein SmpB [Alloactinosynnema album] >emb 6742.4e-89
WP_092626091.1 MULTISPECIES: SsrA-binding protein SmpB [Actinopolyspora] 6742.5e-89
SDJ72044.1 SsrA-binding protein [Actinopolyspora mzabensis] >emb 6742.5e-89

PSORT result

LocalizationCertaintyPSORT said
Not Clear