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IDSACE_1275 TypeCDS
From1398379 nt length960
To1399338 aa length319
Gene pI8.45
DefinitionABC-transport protein, membrane component M.W (Da)33761
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5610 putative peptide ABC transporter permease protein2011.0e-52
coelSCO7564 putative oligopeptide ABC transporter integral membrane protein2149.0e-57
scabSCAB86521 putative peptide ABC transporter permease protein1872.0e-48
saceSCAB86521 putative peptide ABC transporter permease protein1872.0e-48
nfarnfa17470 putative peptide transporter1463.0e-36

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component114-313132.11.7e-38

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009945382.1 ABC transporter permease [Saccharopolyspora erythraea] >emb 14040.0e+00
WP_093261780.1 ABC transporter permease [Saccharopolyspora shandongensis] >... 11761.5e-160
WP_093157759.1 ABC transporter permease [Saccharopolyspora antimicrobica] >... 11751.9e-160
WP_093348682.1 ABC transporter permease [Saccharopolyspora jiangxiensis] >e... 11726.3e-160
WP_029722063.1 ABC transporter permease [Saccharopolyspora rectivirgula] >g... 11326.0e-154
WP_016698444.1 ABC transporter permease [Actinoalloteichus spitiensis] 9331.2e-123
WP_026420329.1 ABC transporter permease [Actinoalloteichus cyanogriseus] 9261.3e-122
WP_088994307.1 ABC transporter permease [Micromonospora echinaurantiaca] >e... 8888.4e-117
SBO93413.1 Putative glutathione transporter, permease component [Nonomuraea... 8823.9e-116
WP_091259133.1 ABC transporter permease [Micromonospora chaiyaphumensis] >e... 8834.2e-116

PSORT result

LocalizationCertaintyPSORT said
Not Clear