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IDSACE_1442 TypeCDS
From1592679 nt length204
To1592882 aa length67
Gene pI4.84
Definitioncold-shock DNA-binding domain protein M.W (Da)7164
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3932 putative cold shock protein1042.0e-24
coelSCO4295 scoF4 cold shock protein927.0e-21
nfarnfa3660 putative cold shock protein963.0e-22

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66106.83.4e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009947714.1 cold-shock protein [Saccharopolyspora erythraea] >emb 3446.4e-42
WP_010692713.1 MULTISPECIES: cold-shock protein [Saccharopolyspora] >emb 2951.8e-34
WP_075126052.1 MULTISPECIES: cold-shock protein [Actinophytocola] >gb 2943.0e-34
WP_018683440.1 MULTISPECIES: cold-shock protein [Actinokineospora] 2934.3e-34
WP_093273004.1 cold-shock protein [Saccharopolyspora shandongensis] >emb 2934.4e-34
WP_093145828.1 MULTISPECIES: cold-shock protein [Saccharopolyspora] >emb 2925.6e-34
WP_091678561.1 cold-shock protein [Amycolatopsis marina] >emb 2917.9e-34
WP_035282823.1 cold-shock protein [Actinokineospora spheciospongiae] >gb 2917.9e-34
WP_043717197.1 cold-shock protein [Kutzneria sp. 744] >gb 2873.3e-33
WP_026919790.1 cold-shock protein [Gordonia shandongensis] 2873.6e-33

PSORT result

LocalizationCertaintyPSORT said
Not Clear