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IDSACE_1506 TypeCDS
From1654398 nt length1893
To1656290 aa length630
GenednaG pI6.47
DefinitionDNA primase (bacterial type) M.W (Da)69408
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5676 putative DNA primase5794.0e-166
coelSCO2468 DNA primase5632.0e-161
sgrSGR_5066 putative DNA primase5611.0e-160
scabSCAB62491 putative DNA primase5793.0e-166
saceSCAB62491 putative DNA primase5793.0e-166
nfarnfa14700 putative DNA primase6860.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Toprim_N1DNA primase catalytic core, N-terminal domain127-254116.01e-33

zf-CHC21CHC2 zinc finger7-101112.55.8e-33

DnaG_DnaB_bind1DNA primase DnaG DnaB-binding479-60684.95.8e-24

Toprim_41Toprim domain263-33360.21.9e-16

DnaB_bind1DnaB-helicase binding domain of primase376-43153.22.3e-14

Toprim_21Toprim-like265-35541.01.8e-10

Toprim1Toprim domain264-33730.04.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948021.1 DNA primase [Saccharopolyspora erythraea] >emb 31140.0e+00
WP_093271772.1 DNA primase [Saccharopolyspora shandongensis] >emb 26600.0e+00
WP_010695621.1 DNA primase [Saccharopolyspora spinosa] 26570.0e+00
WP_093420943.1 DNA primase [Saccharopolyspora flava] 26170.0e+00
SFS93205.1 DNA primase [Saccharopolyspora flava] 26100.0e+00
WP_029722433.1 DNA primase [Saccharopolyspora rectivirgula] >gb 25750.0e+00
WP_019854999.1 DNA primase [Actinopolyspora mortivallis] 24280.0e+00
WP_092523236.1 DNA primase [Actinopolyspora saharensis] >emb 24170.0e+00
WP_017973885.1 DNA primase [Actinopolyspora halophila] 24160.0e+00
WP_093152094.1 DNA primase [Saccharopolyspora antimicrobica] >emb 24140.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear