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IDSACE_1556 TypeCDS
From1704024 nt length375
To1703650 aa length124
Genevsr pI11.02
Definitionvery short patch repair protein M.W (Da)14338
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4677 putative DNA mismatch endonuclease1437.0e-36
scabSCAB57142 putative DNA mismatch endonuclease1575.0e-40
saceSCAB57142 1575.0e-40
nfarnfa2330 putative DNA mismatch endonuclease1073.0e-25

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Vsr1DNA mismatch endonuclease Vsr1-6063.01.6e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_081468349.1 very short patch repair endonuclease [Saccharopolyspora eryt... 5806.3e-76
CAM00878.1 very short patch repair protein [Saccharopolyspora erythraea NRR... 5761.4e-75
WP_017594988.1 very short patch repair endonuclease [Nocardiopsis potens] 4841.9e-61
WP_083501893.1 very short patch repair endonuclease [Microbispora sp. GMKU3... 4852.2e-61
SEG94106.1 T/G mismatch-specific endonuclease [Actinomadura echinospora] 4721.7e-59
WP_090946790.1 very short patch repair endonuclease [Nonomuraea jiangxiensi... 4752.2e-59
WP_093415325.1 very short patch repair endonuclease [Saccharopolyspora flav... 4713.3e-59
WP_020543573.1 very short patch repair endonuclease [Nonomuraea coxensis] 4671.3e-58
WP_083932702.1 very short patch repair endonuclease [Nocardiopsis halophila... 4633.4e-58
WP_031168366.1 very short patch repair endonuclease [Streptosporangium rose... 4581.6e-57

PSORT result

LocalizationCertaintyPSORT said
Not Clear