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IDSACE_1609 TypeCDS
From1766002 nt length2967
To1763036 aa length988
GenehelZ pI5.63
Definitionprobable helicase, Snf2/Rad54 family M.W (Da)106721
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_367 putative SNF2/RAD54 family helicase5503.0e-157
coelSCO6262 putative helicase4651.0e-131
scabSCAB79891 putative SNF2/RAD54 family helicase5042.0e-143
saceSCAB79891 putative SNF2/RAD54 family helicase5042.0e-143
nfarnfa10310 putative helicase6590.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain537-797187.52.5e-55

DUF36701SNF2 Helicase protein338-472140.13.6e-41

Helicase_C1Helicase conserved C-terminal domain813-92556.43e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009950160.1 ATP-dependent helicase [Saccharopolyspora erythraea] 48450.0e+00
CAM00929.1 probable helicase, Snf2/Rad54 family [Saccharopolyspora erythrae... 48440.0e+00
WP_093278771.1 ATP-dependent helicase [Saccharopolyspora shandongensis] 34930.0e+00
SDZ56764.1 Superfamily II DNA or RNA helicase, SNF2 family [Saccharopolyspo... 34930.0e+00
WP_010695396.1 ATP-dependent helicase [Saccharopolyspora spinosa] 34920.0e+00
WP_093151637.1 ATP-dependent helicase [Saccharopolyspora antimicrobica] >em... 34350.0e+00
WP_093352054.1 ATP-dependent helicase [Saccharopolyspora jiangxiensis] >emb... 34230.0e+00
WP_093420732.1 ATP-dependent helicase [Saccharopolyspora flava] >emb 32500.0e+00
WP_091449011.1 ATP-dependent helicase [Alloactinosynnema iranicum] >emb 31940.0e+00
WP_091371590.1 ATP-dependent helicase [Alloactinosynnema album] >emb 31880.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear