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IDSACE_1861 TypeCDS
From2041378 nt length1113
To2040266 aa length370
Gene pI6.16
Definitionputative ATP-dependent DNA ligase M.W (Da)40996
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1697 putative DNA ligase3254.0e-90
coelSCO6707 putative DNA ligase2988.0e-82
sgrSGR_1024 putative DNA ligase3224.0e-89
scabSCAB13591 putative DNA ligase3187.0e-88
saceSCAB13591 putative DNA ligase3187.0e-88
nfarnfa25600 putative ATP-dependent DNA ligase3231.0e-89

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_A_M1ATP dependent DNA ligase domain11-205102.42.3e-29

DNA_ligase_A_C1ATP dependent DNA ligase C terminal region227-33758.19.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942668.1 ATP-dependent DNA ligase [Saccharopolyspora erythraea] >emb 18510.0e+00
WP_093264959.1 ATP-dependent DNA ligase [Saccharopolyspora shandongensis] >... 13660.0e+00
WP_010694984.1 ATP-dependent DNA ligase [Saccharopolyspora spinosa] 13630.0e+00
WP_093417039.1 ATP-dependent DNA ligase [Saccharopolyspora flava] 13490.0e+00
WP_093157525.1 ATP-dependent DNA ligase [Saccharopolyspora antimicrobica] >... 13490.0e+00
WP_093355043.1 ATP-dependent DNA ligase [Saccharopolyspora jiangxiensis] >e... 13450.0e+00
SFS66847.1 ATP-dependent DNA ligase [Saccharopolyspora flava] 13430.0e+00
WP_073485733.1 ATP-dependent DNA ligase [Streptoalloteichus hindustanus] >e... 12042.2e-163
WP_033442765.1 ATP-dependent DNA ligase [Saccharothrix sp. NRRL B-16314] 11531.3e-155
SFK04474.1 ATP-dependent DNA ligase [Amycolatopsis sacchari] 11521.7e-155

PSORT result

LocalizationCertaintyPSORT said
Not Clear