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IDSACE_1965 TypeCDS
From2146714 nt length408
To2146307 aa length135
Gene pI4.62
Definitionputative DNA binding protein M.W (Da)14867
Note AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6439 putative DNA binding protein1175.0e-28

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-6455.92.6e-15

OB_RNB1Ribonuclease B OB domain13-3523.62.8e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942541.1 cold-shock protein [Saccharopolyspora erythraea] >emb 6952.3e-93
KUJ63988.1 DNA-binding protein [Streptomyces albus subsp. albus] 4629.1e-58
EQD81882.1 DNA-binding protein, partial [Saccharopolyspora erythraea D] 4473.7e-56
WP_086716617.1 DNA-binding protein [Streptomyces angustmyceticus] 4453.6e-55
WP_035292289.1 DNA-binding protein [Actinoalloteichus cyanogriseus] 4361.1e-53
SCK45528.1 Cold shock protein, CspA family [Streptomyces sp. SceaMP-e96] 4351.5e-53
CUW01187.1 cold-shock_DNA-binding_domain_protein [Streptomyces caniferus] 4341.8e-53
WP_043509922.1 DNA-binding protein [Actinoalloteichus cyanogriseus] 4281.8e-52
WP_093488040.1 MULTISPECIES: DNA-binding protein [Streptomyces] >emb 4202.3e-51
WP_040902049.1 DNA-binding protein [Streptomyces auratus] 4184.9e-51

PSORT result

LocalizationCertaintyPSORT said
Not Clear