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IDSACE_2114 TypeCDS
From2301315 nt length1293
To2302607 aa length430
Gene pI4.83
Definitionribosomal RNA small subunit methyltransferase M.W (Da)45969
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6878 putative RNA-binding Sun protein3941.0e-110
coelSCO1472 hypothetical protein3688.0e-103
sgrSGR_6062 putative RNA-binding Sun protein3593.0e-100
scabSCAB75351 putative RNA-binding Sun protein3856.0e-108
saceSCAB75351 putative RNA-binding Sun protein3856.0e-108
nfarnfa36070 putative RNA-binding Sun protein4601.0e-130

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Methyltr_RsmB-F116S rRNA methyltransferase RsmB/F247-429155.11.6e-45

NusB1NusB family3-11180.41.2e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM01420.1 ribosomal RNA small subunit methyltransferase [Saccharopolyspora... 20380.0e+00
WP_009943006.1 methyltransferase [Saccharopolyspora erythraea] 20310.0e+00
WP_093276773.1 methyltransferase [Saccharopolyspora shandongensis] >emb 17610.0e+00
WP_010310793.1 methyltransferase [Saccharopolyspora spinosa] 17460.0e+00
WP_093154195.1 methyltransferase [Saccharopolyspora antimicrobica] >emb 17430.0e+00
WP_093345837.1 methyltransferase [Saccharopolyspora jiangxiensis] >emb 17430.0e+00
WP_093423794.1 methyltransferase [Saccharopolyspora flava] >emb 17030.0e+00
WP_029721027.1 methyltransferase [Saccharopolyspora rectivirgula] >gb 16960.0e+00
WP_092627620.1 methyltransferase [Actinopolyspora mzabensis] >emb 15990.0e+00
WP_092981579.1 methyltransferase [Actinopolyspora righensis] >emb 15910.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear