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IDSACE_2224 TypeCDS
From2413919 nt length888
To2413032 aa length295
Gene pI5.96
Definitionglycine betaine transport system permease protein M.W (Da)31342
Note AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6716 putative glycine betaine ABC transport system permease protein2741.0e-74
coelSCO1620 opuABC glycine betaine transport system permease protein2824.0e-77
sgrSGR_5891 putative glycine betaine ABC transporter substrate-binding and permease component2832.0e-77
scabSCAB6981 putative glycine betaine ABC transporter permease protein1612.0e-40
saceSCAB6981 putative glycine betaine ABC transporter permease protein1612.0e-40

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component113-26879.22.9e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009945943.1 glycine/betaine ABC transporter permease [Saccharopolyspora ... 12041.3e-165
WP_093417208.1 glycine/betaine ABC transporter [Saccharopolyspora flava] >e... 9411.1e-125
WP_093260214.1 glycine/betaine ABC transporter [Saccharopolyspora shandonge... 9367.8e-125
WP_010310591.1 glycine/betaine ABC transporter permease [Saccharopolyspora ... 9184.4e-122
WP_093346038.1 glycine/betaine ABC transporter [Saccharopolyspora jiangxien... 9054.0e-120
WP_093155555.1 glycine/betaine ABC transporter [Saccharopolyspora antimicro... 8976.9e-119
WP_020661851.1 glycine/betaine ABC transporter permease [Amycolatopsis benz... 8176.7e-107
WP_037811739.1 glycine/betaine ABC transporter [Streptomyces sp. NRRL F-321... 8109.5e-106
WP_093573930.1 glycine/betaine ABC transporter [Amycolatopsis rubida] >emb 8091.2e-105
WP_009074071.1 glycine/betaine ABC transporter permease [Streptomyces sp. A... 8046.5e-105

PSORT result

LocalizationCertaintyPSORT said
Not Clear