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IDSACE_3130 TypeCDS
From3445722 nt length2520
To3448241 aa length839
Gene pI7.04
DefinitionATP-dependent helicase HrpB M.W (Da)89382
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6231 putative ATP-dependent RNA helicase7490.0e+00
coelSCO2000 putative ATP-binding RNA helicase3673.0e-102
sgrSGR_5532 putative ATP-dependent RNA helicase7310.0e+00
scabSCAB69041 putative ATP-dependent RNA helicase7630.0e+00
saceSCAB69041 7630.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HrpB_C1ATP-dependent helicase C-terminal693-824172.45.4e-51

HA21Helicase associated domain (HA2)386-46751.97.1e-14

Helicase_C1Helicase conserved C-terminal domain207-32442.46.6e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009945286.1 ATP-dependent helicase HrpB [Saccharopolyspora erythraea] >e... 33400.0e+00
WP_093276060.1 ATP-dependent helicase HrpB [Saccharopolyspora shandongensis... 26660.0e+00
WP_093155629.1 ATP-dependent helicase HrpB [Saccharopolyspora antimicrobica... 26300.0e+00
WP_093346160.1 ATP-dependent helicase HrpB [Saccharopolyspora jiangxiensis]... 26300.0e+00
WP_093417313.1 ATP-dependent helicase HrpB [Saccharopolyspora flava] >emb 25630.0e+00
WP_092521613.1 ATP-dependent helicase HrpB [Actinopolyspora saharensis] >em... 21670.0e+00
WP_040811683.1 ATP-dependent helicase HrpB [Nocardia concava] 21500.0e+00
WP_073487272.1 ATP-dependent helicase HrpB [Streptoalloteichus hindustanus]... 21420.0e+00
WP_017974851.1 ATP-dependent helicase HrpB [Actinopolyspora halophila] 21360.0e+00
WP_051152638.1 ATP-dependent helicase HrpB [Nocardia niigatensis] 21350.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear