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IDSACE_3297 TypeCDS
From3647305 nt length1041
To3646265 aa length346
GenecobW pI5.14
Definitioncobalamin synthesis protein M.W (Da)37898
Note AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2424 putative cobalamin synthesis protein3463.0e-96
coelSCO5835 hypothetical protein3355.0e-93
sgrSGR_1690 putative ATP/GTP-binding protein3732.0e-104
scabSCAB24301 putative cobalamin synthesis protein3263.0e-90
saceSCAB24301 putative cobalamin synthesis protein3263.0e-90
nfarnfa43200 putative cobalamin synthesis protein3485.0e-97

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

cobW1CobW/HypB/UreG, nucleotide-binding domain6-181152.76.8e-45

CobW_C1Cobalamin synthesis protein cobW C-terminal domain233-32282.81.1e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946291.1 GTP-binding protein [Saccharopolyspora erythraea] >emb 16600.0e+00
WP_093278323.1 GTP-binding protein [Saccharopolyspora shandongensis] >emb 10491.5e-140
WP_083821603.1 GTP-binding protein [Saccharopolyspora spinosa] 10421.0e-138
WP_030432291.1 GTP-binding protein [Allokutzneria albata] >emb 10248.7e-137
WP_086826520.1 GTP-binding protein [Allokutzneria sp. NRRL B-24872] 10125.6e-135
WP_020666440.1 GTP-binding protein [Amycolatopsis nigrescens] 10067.6e-134
WP_093145741.1 GTP-binding protein [Saccharopolyspora antimicrobica] >emb 10041.3e-133
WP_093356437.1 GTP-binding protein [Saccharopolyspora jiangxiensis] >emb 9971.3e-132
WP_089224710.1 GTP-binding protein [Streptomyces glauciniger] >emb 9607.9e-127
WP_018561577.1 GTP-binding protein [Streptomyces sp. BoleA5] 9502.2e-125

PSORT result

LocalizationCertaintyPSORT said
Not Clear