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IDSACE_3549 TypeCDS
From3909645 nt length909
To3908737 aa length302
Gene pI6.6
DefinitionDNA ligase (ATP) M.W (Da)33488
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2946 putative DNA ligase2763.0e-75
coelSCO5308 hypothetical protein2693.0e-73
sgrSGR_2196 conserved hypothetical protein2556.0e-69
scabSCAB29521 putative DNA ligase2763.0e-75
saceSCAB29521 putative DNA ligase2763.0e-75
nfarnfa6770 putative ATP-dependent DNA ligase2154.0e-57

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942151.1 ATP-dependent DNA ligase [Saccharopolyspora erythraea] >emb 15990.0e+00
WP_093936233.1 ATP-dependent DNA ligase [Amycolatopsis thailandensis] >gb 10063.2e-135
SDU41425.1 bifunctional non-homologous end joining protein LigD [Amycolatop... 10045.4e-135
WP_063277716.1 ATP-dependent DNA ligase [Amycolatopsis keratiniphila] >gb 10031.4e-134
WP_007034675.1 ATP-dependent DNA ligase [Amycolatopsis decaplanina] >gb 10002.5e-134
WP_039916541.1 ATP-dependent DNA ligase [Amycolatopsis azurea] 10002.6e-134
EMD28139.1 ATP-dependent DNA ligase [Amycolatopsis azurea DSM 43854] 9993.9e-134
WP_092532449.1 ATP-dependent DNA ligase [Yuhushiella deserti] >emb 9984.4e-134
AGM04459.1 DNA ligase (ATP) [Amycolatopsis orientalis HCCB10007] 9984.8e-134
KFZ76925.1 ATP-dependent DNA ligase [Amycolatopsis sp. MJM2582] 9985.6e-134

PSORT result

LocalizationCertaintyPSORT said
Not Clear