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IDSACE_3596 TypeCDS
From3959521 nt length1191
To3960711 aa length396
Gene pI7.21
Definitionhypothetical protein M.W (Da)42974
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4753 hypothetical protein5409.0e-155
coelSCO3299 hypothetical protein5216.0e-149
sgrSGR_4185 conserved hypothetical protein5409.0e-155
scabSCAB38881 hypothetical protein5361.0e-153
saceSCAB38881 5361.0e-153
nfarnfa13690 hypothetical protein4952.0e-141

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RtcB1tRNA-splicing ligase RtcB28-396434.44.5e-130

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009949032.1 RtcB family protein [Saccharopolyspora erythraea] >emb 20720.0e+00
WP_094004221.1 RtcB family protein [Amycolatopsis sp. KNN50.9b] >gb 17390.0e+00
WP_027934689.1 RtcB family protein [Amycolatopsis thermoflava] 17290.0e+00
WP_020422856.1 RtcB family protein [Amycolatopsis sp. ATCC 39116] 17260.0e+00
WP_091516349.1 RtcB family protein [Amycolatopsis sacchari] >emb 17250.0e+00
WP_020664140.1 RtcB family protein [Amycolatopsis benzoatilytica] 17230.0e+00
WP_092529744.1 RtcB family protein [Yuhushiella deserti] >emb 17220.0e+00
WP_037808430.1 RtcB family protein [Streptomyces sp. NRRL F-3213] 17200.0e+00
WP_017984169.1 RtcB family protein [Amycolatopsis methanolica] >gb 17190.0e+00
WP_091389365.1 RtcB family protein [Amycolatopsis pretoriensis] >emb 17160.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear