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IDSACE_3709 TypeCDS
From4062726 nt length921
To4061806 aa length306
Gene pI6.64
DefinitionDNA binding protein, Ku-like M.W (Da)35111
Note AseI frg.J/C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2945 putative Ku70/Ku80 protein2187.0e-58
coelSCO5309 hypothetical protein2023.0e-53
sgrSGR_2195 putative Ku70/Ku80 protein2148.0e-57
scabSCAB29491 putative Ku70/Ku80 protein2133.0e-56
saceSCAB29491 putative Ku70/Ku80 protein2133.0e-56
nfarnfa34910 hypothetical protein2362.0e-63

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ku1Ku70/Ku80 beta-barrel domain23-205129.79.9e-38

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011874120.1 DNA repair protein [Saccharopolyspora erythraea] >sp 13210.0e+00
WP_073483563.1 Ku protein [Streptoalloteichus hindustanus] >emb 7921.4e-102
WP_030433058.1 Ku protein, partial [Allokutzneria albata] >emb 7873.0e-102
WP_086827626.1 Ku protein [Allokutzneria sp. NRRL B-24872] 7803.4e-101
WP_015101685.1 Ku protein [Saccharothrix espanaensis] >emb 7752.7e-100
WP_093603104.1 Ku protein [Lentzea waywayandensis] 7732.9e-100
SFR27691.1 DNA end-binding protein Ku [Lentzea waywayandensis] 7733.6e-100
WP_033439929.1 Ku protein [Saccharothrix sp. NRRL B-16314] 7743.6e-100
WP_065919065.1 Ku protein [Lentzea guizhouensis] >gb 7723.6e-100
WP_030466072.1 Ku protein, partial [Lechevalieria aerocolonigenes] 7715.2e-100

PSORT result

LocalizationCertaintyPSORT said
Not Clear