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IDSACE_3716 TypeCDS
From4070861 nt length1830
To4069032 aa length609
Gene pI6.27
DefinitionGAF domain protein M.W (Da)63801
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1419 hypothetical protein4733.0e-134
coelSCO1011 hypothetical protein4211.0e-118
sgrSGR_1197 conserved hypothetical protein6202.0e-178

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain546-60467.46.4e-19

GAF_21GAF domain69-21164.69.9e-18

GAF1GAF domain69-21051.99.5e-14

GAF_31GAF domain70-21142.95.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011874123.1 cyclic diguanylate phosphodiesterase [Saccharopolyspora eryt... 24010.0e+00
WP_009948575.1 GAF domain-containing protein, partial [Saccharopolyspora er... 19090.0e+00
WP_091375895.1 diguanylate phosphodiesterase [Alloactinosynnema album] >emb... 13980.0e+00
WP_026425860.1 diguanylate phosphodiesterase [Actinokineospora inagensis] 13790.0e+00
WP_092781320.1 diguanylate phosphodiesterase [Actinokineospora terrae] >emb... 13672.4e-180
WP_025356791.1 diguanylate phosphodiesterase [Kutzneria albida] >gb 13628.8e-180
WP_020667072.1 hypothetical protein [Amycolatopsis nigrescens] 13621.4e-179
WP_054052615.1 diguanylate phosphodiesterase [Alloactinosynnema sp. L-07] >... 13576.8e-179
KID31201.1 GAF domain-containing protein [Prauserella sp. Am3] 13541.4e-178
EHR60080.1 sugar diacid utilization regulator [Saccharomonospora cyanea NA-1... 13522.1e-178

PSORT result

LocalizationCertaintyPSORT said
Not Clear