-- | --

IDSACE_3840 TypeCDS
From4202835 nt length696
To4202140 aa length231
Gene pI8.9
Definitioncobalamin (vitamin B12) biosynthesis CbiM protein M.W (Da)23011
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3606 putative cobalt ABC transporter permease protein2223.0e-59
coelSCO3159 putative membrane protein.1893.0e-49
sgrSGR_4321 putative membrane protein1901.0e-49
scabSCAB53361 putative cobalt ABC transporter permease protein1863.0e-48
saceSCAB53361 putative cobalt ABC transporter permease protein1863.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CbiM1Cobalt uptake substrate-specific transmembrane region8-214202.18.2e-60

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948277.1 cobalamin biosynthesis protein CbiM [Saccharopolyspora eryth... 5921.2e-74
SDY67049.1 cobalt/nickel transport system permease protein [Saccharopolyspo... 5061.3e-61
SFT01457.1 cobalt/nickel transport system permease protein [Saccharopolyspo... 4981.8e-60
WP_093271303.1 cobalamin biosynthesis protein CbiM [Saccharopolyspora shand... 4851.5e-58
WP_076988945.1 cobalamin biosynthesis protein CbiM [Actinosynnema sp. ALI-1... 4852.2e-58
WP_093422796.1 cobalamin biosynthesis protein CbiM [Saccharopolyspora flava... 4762.9e-57
WP_054289086.1 cobalamin biosynthesis protein CbiM [Kibdelosporangium phyto... 4764.3e-57
WP_042183063.1 cobalamin biosynthesis protein CbiM [Kibdelosporangium sp. M... 4748.5e-57
WP_084432953.1 cobalamin biosynthesis protein CbiM [Kibdelosporangium aridu... 4651.9e-55
WP_033441769.1 cobalamin biosynthesis protein CbiM [Saccharothrix sp. NRRL ... 4573.4e-54

PSORT result

LocalizationCertaintyPSORT said
Not Clear