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IDSACE_4329 TypeCDS
From4852773 nt length1335
To4851439 aa length444
GenehopC pI9.64
Definitionsqualene/phytoene dehydrogenase M.W (Da)47951
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1652 squalene/phytoene dehydrogenase3694.0e-103
coelSCO6762 putative phytoene dehydrogenase3332.0e-92
sgrSGR_964 putative squalene/phytoene dehydrogenase3487.0e-97
scabSCAB12971 squalene/phytoene dehydrogenase3725.0e-104
saceSCAB12971 squalene/phytoene dehydrogenase3725.0e-104

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Amino_oxidase1Flavin containing amine oxidoreductase6-429166.11.5e-48

NAD_binding_81NAD(P)-binding Rossmann-like domain2-5545.08.4e-12

FAD_oxidored1FAD dependent oxidoreductase2-3728.49.2e-07

FAD_binding_21FAD binding domain2-3526.43e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM03598.1 squalene/phytoene dehydrogenase [Saccharopolyspora erythraea NRR... 20360.0e+00
WP_009942892.1 phytoene dehydrogenase [Saccharopolyspora erythraea] 20310.0e+00
WP_093274180.1 phytoene dehydrogenase [Saccharopolyspora shandongensis] 12611.9e-169
WP_093147256.1 phytoene dehydrogenase [Saccharopolyspora antimicrobica] 12272.1e-164
SDZ09225.1 squalene-associated FAD-dependent desaturase [Saccharopolyspora ... 12263.6e-164
SFM53322.1 squalene-associated FAD-dependent desaturase [Saccharopolyspora ... 12212.6e-163
WP_093353760.1 phytoene dehydrogenase [Saccharopolyspora jiangxiensis] 12194.4e-163
SEF96019.1 squalene-associated FAD-dependent desaturase [Saccharopolyspora ... 12125.8e-162
EQD82231.1 hypothetical protein N599_31790, partial [Saccharopolyspora eryth... 11949.8e-162
WP_093422707.1 phytoene dehydrogenase [Saccharopolyspora flava] >emb 12091.8e-161

PSORT result

LocalizationCertaintyPSORT said
Not Clear