-- | --

IDSACE_4759 TypeCDS
From5320046 nt length1215
To5318832 aa length404
Gene pI9.43
Definitionregulatory protein M.W (Da)43705
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2124 putative regulatory protein3563.0e-99
coelSCO6105 putative regulatory protein3294.0e-91
sgrSGR_1389 putative transcriptional regulator3471.0e-96
scabSCAB19741 putative regulatory protein3486.0e-97
saceSCAB19741 putative regulatory protein3486.0e-97
nfarnfa29470 putative transcriptional regulator2601.0e-70

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF1GAF domain107-21739.47e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009951111.1 diguanylate cyclase [Saccharopolyspora erythraea] >emb 20670.0e+00
WP_093260048.1 diguanylate cyclase [Saccharopolyspora shandongensis] >emb 14630.0e+00
WP_029721346.1 diguanylate cyclase [Saccharopolyspora rectivirgula] >gb 13330.0e+00
WP_020417200.1 diguanylate cyclase [Amycolatopsis sp. ATCC 39116] 12019.1e-162
WP_027929441.1 diguanylate cyclase [Amycolatopsis thermoflava] 11982.4e-161
WP_052863455.1 diguanylate cyclase [Streptomyces niger] 11399.4e-152
SNR64855.1 GAF domain-containing protein [Haloechinothrix alba] 10981.0e-145
WP_089302002.1 diguanylate cyclase [Haloechinothrix alba] 10963.4e-145
WP_091508158.1 diguanylate cyclase [Amycolatopsis sacchari] >emb 10881.4e-144
WP_072474998.1 diguanylate cyclase [Amycolatopsis australiensis] >emb 10735.2e-142

PSORT result

LocalizationCertaintyPSORT said
Not Clear