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IDSACE_5232 TypeCDS
From5852743 nt length1443
To5851301 aa length480
Gene pI6.83
Definitionsmall GTP-binding protein domain M.W (Da)52174
Note AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6524 putative GTP-binding protein5784.0e-166
coelSCO1758 putative GTP binding protein5531.0e-158
sgrSGR_5741 putative GTP-binding protein5823.0e-167
scabSCAB72001 putative GTP-binding protein5615.0e-161
saceSCAB72001 5615.0e-161
nfarnfa20130 putative GTP-binding protein5992.0e-172

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MMR_HSR1250S ribosome-binding GTPase43-157, 216-334162.14.1e-48

FeoB_N2Ferrous iron transport protein B43-160, 216-35395.02.9e-27

KH_dom-like1KH-domain-like of EngA bacterial GTPase enzymes, C-terminal390-46891.03.9e-26

GTP_EFTU1Elongation factor Tu GTP binding domain45-16169.82e-19

AIG11AIG1 family44-14542.25.1e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942383.1 ribosome biogenesis GTPase Der [Saccharopolyspora erythraea]... 21950.0e+00
WP_021341558.1 ribosome biogenesis GTPase Der [Saccharopolyspora erythraea]... 21900.0e+00
WP_093277022.1 ribosome biogenesis GTPase Der [Saccharopolyspora shandongen... 18880.0e+00
WP_093157070.1 ribosome biogenesis GTPase Der [Saccharopolyspora antimicrob... 18610.0e+00
WP_093421456.1 ribosome biogenesis GTPase Der [Saccharopolyspora flava] >em... 18610.0e+00
WP_093357412.1 ribosome biogenesis GTPase Der [Saccharopolyspora jiangxiens... 18580.0e+00
WP_029721459.1 ribosome biogenesis GTPase Der [Saccharopolyspora rectivirgu... 18320.0e+00
WP_010697169.1 ribosome biogenesis GTPase Der [Saccharopolyspora spinosa] 18270.0e+00
WP_054048356.1 ribosome biogenesis GTPase Der [Alloactinosynnema sp. L-07] ... 17180.0e+00
WP_065913208.1 ribosome biogenesis GTPase Der [Lentzea guizhouensis] >gb 17160.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear