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IDSACE_5238 TypeCDS
From5858019 nt length729
To5857291 aa length242
GenescpB pI4.01
Definitionputative segregation and condensation protein B M.W (Da)25536
Note AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6511 putative chromosome segregation and condensation protein B2193.0e-58
coelSCO1769 hypothetical protein1993.0e-52
sgrSGR_5728 putative transcriptional regulator2132.0e-56
scabSCAB71871 putative chromosome segregation and condensation protein B1922.0e-50
saceSCAB71871 putative chromosome segregation and condensation protein B1922.0e-50
nfarnfa20100 hypothetical protein1922.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_ScpB1Segregation and condensation complex subunit ScpB71-229174.41.2e-51

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EQD85242.1 segregation and condensation protein B, partial [Saccharopolyspor... 7493.7e-98
WP_009942376.1 SMC-Scp complex subunit ScpB [Saccharopolyspora erythraea] >... 7494.0e-98
WP_085982124.1 SMC-Scp complex subunit ScpB [Saccharopolyspora spinosa] 7074.7e-92
SDZ40523.1 segregation and condensation protein B [Saccharopolyspora shando... 6942.7e-90
WP_093157080.1 SMC-Scp complex subunit ScpB [Saccharopolyspora antimicrobic... 6885.6e-89
SEG53116.1 condensin subunit ScpB [Saccharopolyspora hirsuta] >emb 6831.5e-88
KEI45690.1 S-(hydroxymethyl)glutathione dehydrogenase [Saccharopolyspora rec... 6743.6e-87
SFS95553.1 condensin subunit ScpB [Saccharopolyspora flava] 6731.9e-86
WP_093421955.1 SMC-Scp complex subunit ScpB [Saccharopolyspora flava] 6702.7e-86
WP_081722664.1 SMC-Scp complex subunit ScpB [Saccharopolyspora rectivirgula... 6712.8e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear