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IDSACE_5242 TypeCDS
From5861726 nt length942
To5860785 aa length313
GenexerD pI10.29
Definitionintegrase/recombinase M.W (Da)33615
Note AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_159 putative tyrosine-family recombinase/integrase702.0e-13
nfarnfa20070 putative recombinase3416.0e-95

*avm, Streptomyces avermitilis; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_integrase1Phage integrase family128-293148.21.8e-43

Phage_int_SAM_11Phage integrase, N-terminal SAM-like domain17-10165.34.3e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009942371.1 site-specific tyrosine recombinase XerD [Saccharopolyspora e... 14980.0e+00
WP_029535494.1 site-specific tyrosine recombinase XerD [Saccharopolyspora s... 12045.0e-165
WP_093277071.1 site-specific tyrosine recombinase XerD [Saccharopolyspora s... 11974.9e-164
WP_093421953.1 site-specific tyrosine recombinase XerD [Saccharopolyspora f... 11732.3e-160
WP_093157128.1 site-specific tyrosine recombinase XerD [Saccharopolyspora a... 11541.8e-157
WP_093357459.1 site-specific tyrosine recombinase XerD [Saccharopolyspora j... 11533.1e-157
WP_037332432.1 site-specific tyrosine recombinase XerD [Saccharopolyspora r... 11421.2e-155
KEI45687.1 recombinase XerD [Saccharopolyspora rectivirgula] 11175.3e-152
WP_091287777.1 site-specific tyrosine recombinase XerD [Amycolatopsis xylan... 10724.1e-145
WP_081191048.1 site-specific tyrosine recombinase XerD [Saccharomonospora s... 10724.9e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear