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IDSACE_5278 TypeCDS
From5904370 nt length708
To5903663 aa length235
GenetsnR pI4.86
Definition23S ribosomal RNA methyltransferase M.W (Da)23580
Note AseI frg.O
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6740 putative rRNA methyltransferase1915.0e-50
coelSCO1597 putative rRNA methylase1823.0e-47
sgrSGR_5908 putative rRNA methylase1916.0e-50
scabSCAB73991 putative rRNA methyltransferase1911.0e-49
saceSCAB73991 putative rRNA methyltransferase1911.0e-49
nfarnfa19170 putative ribosomal RNA methyltransferase1622.0e-41

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family81-225115.51.8e-33

SpoU_sub_bind1RNA 2'-O ribose methyltransferase substrate binding3-6637.61.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM04517.1 23S ribosomal RNA methyltransferase [Saccharopolyspora erythraea... 7882.6e-104
WP_081468427.1 RNA methyltransferase [Saccharopolyspora erythraea] 7846.1e-103
SFO81846.1 RNA methyltransferase, TrmH family [Saccharopolyspora antimicrob... 6543.5e-84
SEG97820.1 RNA methyltransferase, TrmH family [Saccharopolyspora hirsuta] >... 6535.9e-84
WP_093159893.1 RNA methyltransferase [Saccharopolyspora antimicrobica] 6571.2e-83
WP_093358834.1 RNA methyltransferase [Saccharopolyspora jiangxiensis] 6551.9e-83
WP_083822288.1 RNA methyltransferase [Saccharopolyspora spinosa] 6534.5e-83
SFS62776.1 RNA methyltransferase, TrmH family [Saccharopolyspora flava] 6391.0e-81
SDX81743.1 RNA methyltransferase, TrmH family [Saccharopolyspora shandongen... 6371.5e-81
WP_093416877.1 RNA methyltransferase [Saccharopolyspora flava] 6413.0e-81

PSORT result

LocalizationCertaintyPSORT said
Not Clear