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IDSACE_5279 TypeCDS
From5904885 nt length369
To5904517 aa length122
GenerplT pI11.8
Definition50S ribosomal subunit protein L20 M.W (Da)13986
Note AseI frg.O
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6739 putative ribosomal protein L201905.0e-50
coelSCO1598 50S ribosomal protein L201482.0e-37
sgrSGR_5907 putative ribosomal protein L201935.0e-51
scabSCAB73981 putative ribosomal protein L201921.0e-50
saceSCAB73981 putative ribosomal protein L201921.0e-50
nfarnfa19160 putative ribosomal protein L201499.0e-38

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L201Ribosomal protein L203-109150.11.7e-44

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009951173.1 50S ribosomal protein L20 [Saccharopolyspora erythraea] >sp 6272.3e-83
WP_093266845.1 50S ribosomal protein L20 [Saccharopolyspora shandongensis] ... 5855.4e-77
WP_029721971.1 50S ribosomal protein L20 [Saccharopolyspora rectivirgula] >... 5812.3e-76
WP_010313611.1 50S ribosomal protein L20 [Saccharopolyspora spinosa] 5812.3e-76
WP_093159788.1 MULTISPECIES: 50S ribosomal protein L20 [Saccharopolyspora] ... 5812.6e-76
WP_093415812.1 50S ribosomal protein L20 [Saccharopolyspora flava] >emb 5803.1e-76
WP_092521790.1 50S ribosomal protein L20 [Actinopolyspora saharensis] >emb 5395.8e-70
WP_092928446.1 50S ribosomal protein L20 [Actinopolyspora alba] >emb 5352.1e-69
WP_017974590.1 50S ribosomal protein L20 [Actinopolyspora halophila] 5352.5e-69
WP_019854196.1 50S ribosomal protein L20 [Actinopolyspora mortivallis] 5352.6e-69

PSORT result

LocalizationCertaintyPSORT said
Not Clear