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IDSACE_5431 TypeCDS
From6073410 nt length1506
To6071905 aa length501
GenerpsA pI4.34
Definition30S ribosomal protein S1 M.W (Da)55367
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6233 putative ribosomal protein S17720.0e+00
coelSCO1998 30S ribosomal protein S17200.0e+00
sgrSGR_5534 putative 30S ribosomal protein S17630.0e+00
scabSCAB69061 putative ribosomal protein S17770.0e+00
saceSCAB69061 putative ribosomal protein S17770.0e+00
nfarnfa18970 putative ribosomal protein S17320.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

S14S1 RNA binding domain40-112, 128-195, 213-284, 298-370258.62e-78

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009947512.1 30S ribosomal protein S1 [Saccharopolyspora erythraea] >emb 21960.0e+00
WP_093273171.1 30S ribosomal protein S1 [Saccharopolyspora shandongensis] >... 21170.0e+00
WP_093416027.1 30S ribosomal protein S1 [Saccharopolyspora flava] >emb 21100.0e+00
WP_010694529.1 30S ribosomal protein S1 [Saccharopolyspora spinosa] 20710.0e+00
WP_029721525.1 30S ribosomal protein S1 [Saccharopolyspora rectivirgula] >g... 20690.0e+00
WP_093156145.1 MULTISPECIES: 30S ribosomal protein S1 [Saccharopolyspora] >... 20560.0e+00
WP_073480441.1 30S ribosomal protein S1 [Streptoalloteichus hindustanus] >e... 20490.0e+00
WP_081191086.1 30S ribosomal protein S1 [Saccharomonospora sp. LRS4.154] >g... 20460.0e+00
WP_024877877.1 30S ribosomal protein S1 [Saccharomonospora sp. CNQ490] 20450.0e+00
WP_019854568.1 30S ribosomal protein S1 [Actinopolyspora mortivallis] 20450.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear