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IDSACE_5620 TypeCDS
From6317326 nt length333
To6317658 aa length110
Gene pI8.49
Definitionprotein of unknown function UPF0060 M.W (Da)11746
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4756 hypothetical protein1621.0e-41
coelSCO3297 conserved hypothetical protein1402.0e-35
scabSCAB89201 hypothetical protein1626.0e-42
saceSCAB89201 hypothetical protein1626.0e-42
nfarnfa36830 hypothetical protein1472.0e-37

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UPF00601Uncharacterised BCR, YnfA/UPF0060 family4-110154.67.6e-46

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
A4FL81.1 RecName: Full=UPF0060 membrane protein SACE_5620 >emb 5332.3e-69
WP_029621471.1 hypothetical protein [Saccharopolyspora erythraea] 5253.2e-68
WP_010307151.1 hypothetical protein [Saccharopolyspora spinosa] 4908.5e-63
WP_043625711.1 YnfA family protein [Nonomuraea candida] 4768.5e-61
WP_073479651.1 YnfA family protein [Streptoalloteichus hindustanus] >emb 4751.4e-60
WP_029722425.1 YnfA family protein [Saccharopolyspora rectivirgula] >gb 4724.0e-60
WP_093412991.1 YnfA family protein [Saccharopolyspora flava] >emb 4708.7e-60
WP_015746142.1 YnfA family protein [Nakamurella multipartita] >gb 4709.5e-60
WP_055968382.1 MULTISPECIES: YnfA family protein [Aeromicrobium] >gb 4709.7e-60
WP_075951590.1 YnfA family protein [Pseudonocardia sp. CNS-004] >gb 4691.4e-59

PSORT result

LocalizationCertaintyPSORT said
Not Clear