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IDSACE_5726 TypeCDS
From6426925 nt length453
To6426473 aa length150
Gene pI7.51
DefinitionErfK/YbiS/YcfS/YnhG M.W (Da)15414
Note AseI frg.A
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4966 hypothetical protein793.0e-16
sgrSGR_2645 conserved hypothetical protein821.0e-17
scabSCAB8341 932.0e-20
saceSCAB8341 932.0e-20
nfarnfa11690 hypothetical protein1174.0e-28

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain44-14854.31.7e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948106.1 L,D-transpeptidase [Saccharopolyspora erythraea] >emb 6558.8e-87
WP_093267030.1 hypothetical protein [Saccharopolyspora shandongensis] >emb 5681.9e-73
WP_010315714.1 L,D-transpeptidase [Saccharopolyspora spinosa] 5646.8e-73
WP_094009144.1 hypothetical protein [Amycolatopsis sp. KNN50.9b] >gb 3892.3e-46
SEP52987.1 L,D-transpeptidase catalytic domain [Amycolatopsis saalfeldensis... 3942.3e-46
WP_084215985.1 hypothetical protein [Pseudonocardia spinosispora] 3934.2e-46
WP_075978266.1 hypothetical protein [Actinokineospora bangkokensis] >gb 3892.2e-45
WP_020669406.1 L,D-transpeptidase [Amycolatopsis nigrescens] 3807.0e-45
WP_020421396.1 L,D-transpeptidase [Amycolatopsis sp. ATCC 39116] 3798.8e-45
WP_051895351.1 L,D-transpeptidase [Kibdelosporangium aridum] >emb 3781.0e-44

PSORT result

LocalizationCertaintyPSORT said
Not Clear