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IDSACE_5815 TypeCDS
From6529874 nt length3585
To6526290 aa length1194
GenednaE pI5.13
DefinitionDNA polymerase III alpha subunit M.W (Da)131197
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6143 putative DNA polymerase III alpha subunit12660.0e+00
coelSCO2064 putative DNA polymerase III alpha chain12520.0e+00
sgrSGR_5440 putative DNA polymerase III alpha subunit12890.0e+00
scabSCAB68251 putative DNA polymerase III alpha subunit12530.0e+00
saceSCAB68251 putative DNA polymerase III alpha subunit12530.0e+00
nfarnfa18000 putative DNA polymerase III alpha subunit14740.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha subunit322-763524.81.3e-157

PHP1PHP domain8-200167.52.7e-49

HHH_61Helix-hairpin-helix motif836-92385.71.8e-24

tRNA_anti-codon1OB-fold nucleic acid binding domain1028-110235.66.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943181.1 DNA polymerase III subunit alpha [Saccharopolyspora erythrae... 61520.0e+00
WP_093261546.1 DNA polymerase III subunit alpha [Saccharopolyspora shandong... 56230.0e+00
WP_029722385.1 DNA polymerase III subunit alpha [Saccharopolyspora rectivir... 54460.0e+00
WP_043572016.1 DNA polymerase III subunit alpha [Actinopolyspora erythraea]... 52510.0e+00
WP_092924620.1 DNA polymerase III subunit alpha [Actinopolyspora alba] >emb... 52460.0e+00
WP_092600034.1 DNA polymerase III subunit alpha [Actinopolyspora xinjiangen... 52380.0e+00
WP_092522253.1 DNA polymerase III subunit alpha [Actinopolyspora saharensis... 52310.0e+00
WP_017974172.1 DNA polymerase III subunit alpha [Actinopolyspora halophila] 52310.0e+00
WP_092627344.1 DNA polymerase III subunit alpha [Actinopolyspora mzabensis]... 52300.0e+00
WP_093358504.1 DNA polymerase III subunit alpha [Saccharopolyspora jiangxie... 52290.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear