-- | --

IDSACE_5879 TypeCDS
From6602171 nt length519
To6601653 aa length172
Gene pI4.53
Definitionhypothetical protein M.W (Da)18034
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2505 putative DNA-binding protein753.0e-15
sgrSGR_1766 conserved hypothetical protein731.0e-14
scabSCAB25071 putative DNA-binding protein805.0e-17
saceSCAB25071 putative DNA-binding protein805.0e-17

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain9-6643.23.3e-11

HTH_191Helix-turn-helix domain10-7138.58.4e-10

HTH_31Helix-turn-helix13-6733.72.6e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011874873.1 XRE family transcriptional regulator [Saccharopolyspora eryt... 7795.7e-105
WP_093261630.1 XRE family transcriptional regulator [Saccharopolyspora shan... 5182.3e-65
WP_010306452.1 XRE family transcriptional regulator [Saccharopolyspora spin... 4852.5e-60
WP_092924580.1 transcriptional regulator [Actinopolyspora alba] >emb 4698.8e-58
WP_093146490.1 MULTISPECIES: transcriptional regulator [Saccharopolyspora] ... 4671.1e-57
WP_092977635.1 XRE family transcriptional regulator [Actinopolyspora righen... 4662.1e-57
WP_092600110.1 XRE family transcriptional regulator [Actinopolyspora xinjia... 4602.2e-56
WP_092627317.1 XRE family transcriptional regulator [Actinopolyspora mzaben... 4593.2e-56
WP_017974135.1 XRE family transcriptional regulator [Actinopolyspora haloph... 4523.2e-55
WP_043572055.1 XRE family transcriptional regulator [Actinopolyspora erythr... 4471.8e-54

PSORT result

LocalizationCertaintyPSORT said
Not Clear