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IDSACE_5905 TypeCDS
From6630136 nt length1257
To6628880 aa length418
Gene pI9.5
Definitionprotein of unknown function DUF1006 M.W (Da)46446
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5069 hypothetical protein2103.0e-55
coelSCO3007 hypothetical protein2071.0e-54
sgrSGR_4529 conserved hypothetical protein2128.0e-56
scabSCAB55351 hypothetical protein2196.0e-58
saceSCAB55351 2196.0e-58
nfarnfa38710 hypothetical protein4046.0e-114

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain48-392268.49.8e-80

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAM05088.1 protein of unknown function DUF1006 [Saccharopolyspora erythraea... 20690.0e+00
WP_031334064.1 winged helix-turn-helix domain-containing protein [Saccharop... 20130.0e+00
WP_081468240.1 winged helix-turn-helix domain-containing protein [Saccharop... 18500.0e+00
WP_010306368.1 winged helix-turn-helix domain-containing protein [Saccharop... 16390.0e+00
WP_093147504.1 winged helix-turn-helix domain-containing protein [Saccharop... 16160.0e+00
WP_093413230.1 winged helix-turn-helix domain-containing protein [Saccharop... 16160.0e+00
WP_093348149.1 winged helix-turn-helix domain-containing protein [Saccharop... 16090.0e+00
WP_093261760.1 winged helix-turn-helix domain-containing protein [Saccharop... 16090.0e+00
SFM67299.1 hypothetical protein SAMN05421805_1011121 [Saccharopolyspora ant... 16030.0e+00
SEG65115.1 hypothetical protein SAMN02982929_02917 [Saccharopolyspora hirsu... 15970.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear