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IDSACE_5921 TypeCDS
From6648255 nt length1326
To6646930 aa length441
GenedinF pI10.05
DefinitionDNA-damage-inducible protein F M.W (Da)45812
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4285 putative DNA-damage-inducible protein F2302.0e-61
coelSCO3910 hypothetical protein2103.0e-55
sgrSGR_3670 putative DNA-damage-inducible protein F2495.0e-67
scabSCAB46141 putative DNA-damage-inducible protein F2312.0e-61
saceSCAB46141 putative DNA-damage-inducible protein F2312.0e-61
nfarnfa40630 putative DNA-damage-inducible protein F3571.0e-99

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MatE2MatE19-179, 236-386156.24.9e-46

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011874887.1 MATE family efflux transporter [Saccharopolyspora erythraea]... 15470.0e+00
WP_010306322.1 MATE family efflux transporter [Saccharopolyspora spinosa] 13331.5e-180
WP_093413254.1 MATE family efflux transporter [Saccharopolyspora flava] >em... 13052.5e-176
WP_093344783.1 MATE family efflux transporter [Saccharopolyspora jiangxiens... 12765.9e-172
WP_093146534.1 MATE family efflux transporter [Saccharopolyspora antimicrob... 12705.7e-171
WP_093261687.1 MATE family efflux transporter [Saccharopolyspora shandongen... 12551.2e-168
WP_029719307.1 MATE family efflux transporter [Saccharopolyspora rectivirgu... 12053.8e-161
KEI44389.1 multidrug transporter MatE [Saccharopolyspora rectivirgula] 12047.2e-161
WP_092600171.1 MATE family efflux transporter [Actinopolyspora xinjiangensi... 12021.2e-160
WP_017974109.1 MATE family efflux transporter [Actinopolyspora halophila] 11951.7e-159

PSORT result

LocalizationCertaintyPSORT said
Not Clear