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IDSACE_5942 TypeCDS
From6669033 nt length1491
To6670523 aa length496
Gene pI10.96
DefinitionATP-dependent RNA helicase M.W (Da)52741
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4446 putative ATP-dependent RNA helicase4411.0e-124
coelSCO3732 putative DEAD-box RNA helicase3964.0e-111
sgrSGR_5496 putative DEAD-box RNA helicase4472.0e-126
scabSCAB87601 putative ATP-dependent RNA helicase4411.0e-124
saceSCAB87601 putative ATP-dependent RNA helicase4411.0e-124
nfarnfa25160 putative RNA helicase4123.0e-116

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase39-207146.36.7e-43

Helicase_C1Helicase conserved C-terminal domain251-34887.95.1e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_081468250.1 ATP-dependent helicase [Saccharopolyspora erythraea] 19620.0e+00
WP_011874894.1 ATP-dependent helicase [Saccharopolyspora erythraea] >emb 19570.0e+00
WP_093262963.1 ATP-dependent helicase [Saccharopolyspora shandongensis] >em... 17170.0e+00
SFM68596.1 Superfamily II DNA and RNA helicase [Saccharopolyspora antimicro... 17120.0e+00
WP_010306252.1 ATP-dependent helicase, partial [Saccharopolyspora spinosa] 17120.0e+00
WP_093344726.1 ATP-dependent helicase [Saccharopolyspora jiangxiensis] >emb... 17080.0e+00
WP_093147521.1 ATP-dependent helicase [Saccharopolyspora antimicrobica] 17030.0e+00
WP_093413281.1 ATP-dependent helicase [Saccharopolyspora flava] >emb 16440.0e+00
WP_083886503.1 ATP-dependent helicase, partial [Actinoalloteichus spitiensi... 13398.5e-180
WP_030108714.1 ATP-dependent helicase [Kutzneria albida] 13381.4e-179

PSORT result

LocalizationCertaintyPSORT said
Not Clear