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IDSACE_5992 TypeCDS
From6727938 nt length1158
To6726781 aa length385
Gene pI5.17
Definition1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase M.W (Da)40670
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2561 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6420.0e+00
coelSCO5696 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5962.0e-171
sgrSGR_1821 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6191.0e-178
scabSCAB25451 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6330.0e+00
saceSCAB25451 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6330.0e+00
nfarnfa41180 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5983.0e-172

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GcpE1GcpE protein21-361449.38e-135

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009943693.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 18350.0e+00
WP_093262840.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17460.0e+00
WP_093413340.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17400.0e+00
WP_010306079.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17370.0e+00
WP_093146601.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17360.0e+00
WP_093344613.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17350.0e+00
WP_027935889.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycol... 17320.0e+00
WP_029722073.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccha... 17300.0e+00
WP_026153926.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate sy... 17300.0e+00
WP_094007886.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycol... 17280.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear