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IDSACE_6142 TypeCDS
From6888210 nt length648
To6887563 aa length215
Gene pI12.43
Definitionhistone-like DNA binding protein M.W (Da)22324
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2684 putative histone-like DNA-binding protein1223.0e-29
sgrSGR_1926 putative histone-like DNA-binding protein1248.0e-30
scabSCAB26581 putative histone-like DNA-binding protein1162.0e-27
saceSCAB26581 putative histone-like DNA-binding protein1162.0e-27

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-8889.41.2e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009944412.1 HU family DNA-binding protein [Saccharopolyspora erythraea] ... 4491.8e-53
WP_093413470.1 DNA-binding protein [Saccharopolyspora flava] >emb 4311.7e-50
WP_081722499.1 DNA-binding protein [Saccharopolyspora rectivirgula] 4251.4e-49
WP_092600390.1 hypothetical protein [Actinopolyspora xinjiangensis] 4244.0e-48
WP_092928968.1 hypothetical protein [Actinopolyspora alba] >emb 4237.4e-48
WP_084133985.1 hypothetical protein [Actinopolyspora erythraea] 4227.4e-48
WP_092632166.1 hypothetical protein [Actinopolyspora mzabensis] 4218.1e-48
WP_017973980.1 HU family DNA-binding protein [Actinopolyspora halophila] 4171.7e-47
WP_019854908.1 HU family DNA-binding protein [Actinopolyspora mortivallis] 4091.7e-47
WP_092523082.1 hypothetical protein [Actinopolyspora saharensis] 4182.6e-47

PSORT result

LocalizationCertaintyPSORT said
Not Clear