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IDSACE_6143 TypeCDS
From6889042 nt length603
To6888440 aa length200
GeneleuD pI5.71
Definition3-isopropylmalate dehydratase small subunit M.W (Da)22323
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2685 putative 3-isopropylmalate dehydratase subunit small2584.0e-70
coelSCO5554 3-isopropylmalate dehydratase small subunit2484.0e-67
sgrSGR_1928 putative 3-isopropylmalate dehydratase small subunit2639.0e-72
scabSCAB26601 putative 3-isopropylmalate dehydratase subunit small2561.0e-69
saceSCAB26601 putative 3-isopropylmalate dehydratase subunit small2561.0e-69
nfarnfa42110 putative isopropylmalate isomerase subunit 3036.0e-84

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Aconitase_C1Aconitase C-terminal domain1-11486.31.9e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009944411.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 10484.3e-145
WP_093262617.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9618.6e-132
WP_093146708.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9558.3e-131
WP_093413471.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9541.0e-130
WP_093357520.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9512.9e-130
WP_010305666.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9304.9e-127
WP_029720825.1 3-isopropylmalate dehydratase small subunit [Saccharopolyspo... 9261.8e-126
WP_092600392.1 3-isopropylmalate dehydratase small subunit [Actinopolyspora... 9001.7e-122
WP_043572281.1 3-isopropylmalate dehydratase small subunit [Actinopolyspora... 8941.4e-121
WP_092632169.1 3-isopropylmalate dehydratase small subunit [Actinopolyspora... 8922.9e-121

PSORT result

LocalizationCertaintyPSORT said
Not Clear