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IDSACE_6203 TypeCDS
From6954894 nt length3945
To6950950 aa length1314
GenehrpA pI7.38
DefinitionATP-dependent helicase M.W (Da)148574
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase17220.0e+00
coelSCO4092 ATP-dependent helicase16340.0e+00
sgrSGR_3884 putative ATP-dependent helicase16910.0e+00
scabSCAB47921 putative ATP-dependent helicase16900.0e+00
saceSCAB47921 putative ATP-dependent helicase16900.0e+00
nfarnfa37970 putative ATP-dependent helicase13520.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)727-1308792.42.6e-238

HA21Helicase associated domain (HA2)470-56164.77.4e-18

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold609-71359.92.1e-16

Helicase_C1Helicase conserved C-terminal domain291-40743.72.7e-11

DEAD1DEAD/DEAH box helicase89-23429.07.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011874978.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora erythraea... 67750.0e+00
WP_093262516.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora shandonge... 54690.0e+00
WP_029534850.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora spinosa] 54620.0e+00
SFM74856.1 ATP-dependent helicase HrpA [Saccharopolyspora antimicrobica] 54500.0e+00
WP_093146749.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora antimicro... 54480.0e+00
WP_093357570.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora jiangxien... 54390.0e+00
SEG60881.1 ATP-dependent helicase HrpA [Saccharopolyspora hirsuta] >emb 54390.0e+00
WP_093413541.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora flava] 52180.0e+00
SFS37845.1 ATP-dependent helicase HrpA [Saccharopolyspora flava] 51450.0e+00
WP_029720868.1 ATP-dependent RNA helicase HrpA [Saccharopolyspora rectivirg... 51080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear