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IDSACE_6384 TypeCDS
From7151378 nt length3714
To7155091 aa length1237
Gene pI7.18
DefinitionABC transporter protein, ATP-binding component M.W (Da)131590
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5299 putative ABC transporter ATP-binding protein12170.0e+00
coelSCO2763 ABC transporter protein ATP-binding component.11210.0e+00
sgrSGR_4791 putative ABC transporter ATPase and permease component11910.0e+00
scabSCAB58231 putative ABC transporter ATP-binding protein11450.0e+00
saceSCAB58231 11450.0e+00
nfarnfa46940 putative ABC transporter ATP-binding protein10700.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane2ABC transporter transmembrane region29-295, 669-938228.69.6e-68

ABC_tran2ABC transporter358-512, 1002-1151195.25.6e-58

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011875028.1 ABC transporter ATP-binding protein [Saccharopolyspora eryth... 50410.0e+00
EQD87109.1 ABC transporter [Saccharopolyspora erythraea D] 50350.0e+00
WP_093157875.1 ABC transporter ATP-binding protein [Saccharopolyspora antim... 39280.0e+00
WP_093276677.1 ABC transporter ATP-binding protein [Saccharopolyspora shand... 39160.0e+00
WP_093356984.1 ABC transporter ATP-binding protein [Saccharopolyspora jiang... 38200.0e+00
SFO58511.1 ATP-binding cassette, subfamily B [Saccharopolyspora antimicrobi... 38110.0e+00
SDZ37616.1 ATP-binding cassette, subfamily B [Saccharopolyspora shandongens... 38070.0e+00
WP_010304882.1 ABC transporter ATP-binding protein [Saccharopolyspora spino... 37860.0e+00
WP_093413724.1 ABC transporter ATP-binding protein [Saccharopolyspora flava... 37480.0e+00
WP_037331469.1 ABC transporter ATP-binding protein [Saccharopolyspora recti... 36830.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear