ID	SACE_6402	Type	CDS
From	7173721	nt length	600
To	7173122	aa length	199
Gene	sig49	pI	6.64
Definition	RNA polymerase ECF-subfamily sigma factor	M.W (Da)	21891
Note		AseI frg.	A
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	22-88	53.4	1.5e-14
	Sigma70_r4_2	1	Sigma-70, region 4	125-175	51.6	4.9e-14
	Sigma70_r4	1	Sigma-70, region 4	128-177	37.4	1.2e-09
	Sigma70_ECF	1	ECF sigma factor	36-177	29.1	7.5e-07

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_011875034.1	RNA polymerase sigma factor [Saccharopolyspora erythraea] >e...	1008	6.8e-139
EME64353.1	RNA polymerase sigma-70 factor, ECF subfamily protein [Amycolatop...	568	7.1e-72
WP_084749427.1	RNA polymerase sigma factor [Amycolatopsis coloradensis]	568	8.2e-72
OLZ55728.1	RNA polymerase subunit sigma-70 [Amycolatopsis coloradensis]	568	9.9e-72
WP_051071876.1	RNA polymerase sigma factor [Amycolatopsis decaplanina]	567	1.1e-71
WP_043782485.1	sigma-70 family RNA polymerase sigma factor [Amycolatopsis r...	566	1.1e-71
WP_086674498.1	sigma-70 family RNA polymerase sigma factor [Amycolatopsis p...	566	1.2e-71
WP_091318753.1	sigma-70 family RNA polymerase sigma factor [Amycolatopsis t...	565	1.7e-71
WP_072475886.1	sigma-70 family RNA polymerase sigma factor [Amycolatopsis a...	562	5.2e-71
WP_013230397.1	sigma-70 family RNA polymerase sigma factor [Amycolatopsis m...	561	7.3e-71

PSORT result

Localization	Certainty	PSORT said
Not Clear

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