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IDSACE_6443 TypeCDS
From7224376 nt length696
To7223681 aa length231
Gene pI6.18
DefinitionS30AE family protein M.W (Da)26076
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5067 putative sigma 54 modulation protein/ribosomal protein S30EA1777.0e-46
coelSCO3009 hypothetical protein1593.0e-40
sgrSGR_4527 conserved hypothetical protein1801.0e-46
scabSCAB55331 putative sigma 54 modulation protein/ribosomal protein S30EA1731.0e-44
saceSCAB55331 1731.0e-44
nfarnfa46070 hypothetical protein1983.0e-52

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosom_S30AE_C1Sigma 54 modulation/S30EA ribosomal protein C terminus168-22281.72e-23

Ribosomal_S30AE1Sigma 54 modulation protein / S30EA ribosomal protein3-9873.61.5e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009950958.1 ribosomal subunit interface protein [Saccharopolyspora eryth... 9281.0e-125
WP_010315567.1 ribosomal subunit interface protein [Saccharopolyspora spino... 7891.1e-104
WP_093267137.1 ribosomal subunit interface protein [Saccharopolyspora shand... 7707.8e-102
WP_093160532.1 MULTISPECIES: ribosomal subunit interface protein [Saccharop... 7602.8e-100
WP_093413763.1 ribosomal subunit interface protein [Saccharopolyspora flava... 7379.5e-97
WP_017973463.1 ribosomal subunit interface protein [Actinopolyspora halophi... 6643.2e-85
WP_092928069.1 ribosomal subunit interface protein [Actinopolyspora alba] >... 6556.1e-84
WP_092974919.1 ribosomal subunit interface protein [Actinopolyspora righens... 6556.2e-84
WP_092629563.1 ribosomal subunit interface protein [Actinopolyspora mzabens... 6512.2e-83
WP_092523899.1 ribosomal subunit interface protein [Actinopolyspora saharen... 6503.7e-83

PSORT result

LocalizationCertaintyPSORT said
Not Clear