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IDSACE_6801 TypeCDS
From7610653 nt length891
To7609763 aa length296
GenetruA pI8.27
DefinitiontRNA pseudouridine synthase A M.W (Da)32518
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4955 putative pseudouridine synthase2472.0e-66
coelSCO4731 putative pseudouridylate synthase2454.0e-66
sgrSGR_2805 putative pseudouridine synthase2401.0e-64
scabSCAB36651 putative pseudouridine synthase2479.0e-67
saceSCAB36651 putative pseudouridine synthase2479.0e-67
nfarnfa8390 putative tRNA pseudouridine synthase2449.0e-66

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_12tRNA pseudouridine synthase21-81, 174-274108.71.7e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948674.1 tRNA pseudouridine(38-40) synthase [Saccharopolyspora erythr... 13610.0e+00
WP_029536133.1 tRNA pseudouridine(38-40) synthase [Saccharopolyspora spinos... 10731.1e-145
WP_093155187.1 tRNA pseudouridine(38-40) synthase TruA [Saccharopolyspora a... 10712.2e-145
WP_029719707.1 tRNA pseudouridine(38-40) synthase [Saccharopolyspora rectiv... 10712.3e-145
WP_093265613.1 tRNA pseudouridine(38-40) synthase TruA [Saccharopolyspora s... 10633.1e-144
WP_093352267.1 tRNA pseudouridine(38-40) synthase TruA [Saccharopolyspora j... 10555.4e-143
WP_038531841.1 tRNA pseudouridine(38-40) synthase [Amycolatopsis methanolic... 10512.9e-142
WP_027935794.1 tRNA pseudouridine(38-40) synthase [Amycolatopsis sp. ATCC 3... 10496.2e-142
WP_037322677.1 tRNA pseudouridine(38-40) synthase [Amycolatopsis thermoflav... 10471.2e-141
WP_094003914.1 tRNA pseudouridine(38-40) synthase TruA [Amycolatopsis sp. K... 10401.7e-140

PSORT result

LocalizationCertaintyPSORT said
Not Clear