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IDSACE_6804 TypeCDS
From7613106 nt length606
To7612501 aa length201
GenerpsD pI10.72
Definition30S ribosomal protein S4 M.W (Da)23225
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6847 putative ribosomal protein S41441.0e-35
coelSCO1505 30S ribosomal protein S41315.0e-32
sgrSGR_6030 putative 30S ribosomal protein S41484.0e-37
scabSCAB75031 putative ribosomal protein S41448.0e-36
saceSCAB75031 putative ribosomal protein S41448.0e-36
nfarnfa8360 putative ribosomal protein S43112.0e-86

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S41Ribosomal protein S4/S9 N-terminal domain3-90102.81.4e-29

S41S4 domain92-13771.53.1e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009948669.1 30S ribosomal protein S4 [Saccharopolyspora erythraea] >sp 10623.4e-147
WP_093155192.1 MULTISPECIES: 30S ribosomal protein S4 [Saccharopolyspora] >... 10224.3e-141
WP_093414152.1 30S ribosomal protein S4 [Saccharopolyspora flava] >emb 10181.7e-140
WP_010315357.1 30S ribosomal protein S4 [Saccharopolyspora spinosa] 10147.2e-140
WP_093265617.1 30S ribosomal protein S4 [Saccharopolyspora shandongensis] >... 10104.0e-139
WP_029719710.1 30S ribosomal protein S4 [Saccharopolyspora rectivirgula] >g... 9931.4e-136
WP_017976781.1 30S ribosomal protein S4 [Actinopolyspora halophila] 9671.3e-132
WP_019852843.1 30S ribosomal protein S4 [Actinopolyspora mortivallis] 9661.8e-132
WP_092526015.1 30S ribosomal protein S4 [Actinopolyspora saharensis] >emb 9652.3e-132
WP_092597428.1 30S ribosomal protein S4 [Actinopolyspora xinjiangensis] >em... 9626.0e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear