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IDSACE_7086 TypeCDS
From7892765 nt length1164
To7893928 aa length387
Gene pI5.44
Definitiondihydrouridine synthase TIM-barrel protein nifR3 M.W (Da)41876
Note AseI frg.P
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5649 putative dihydrouridine synthase4623.0e-131
coelSCO2497 hypothetical protein4346.0e-123
sgrSGR_5047 putative dihydrouridine synthase4502.0e-127
scabSCAB62091 putative dihydrouridine synthase4693.0e-133
saceSCAB62091 putative dihydrouridine synthase4693.0e-133
nfarnfa6060 putative dihydrouridine synthase5545.0e-159

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Dus1Dihydrouridine synthase (Dus)30-335351.82.6e-105

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009946064.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora erythra... 18750.0e+00
WP_093354499.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora jiangxi... 17020.0e+00
WP_093159568.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora antimic... 17020.0e+00
SEG90942.1 putative TIM-barrel protein, nifR3 family [Saccharopolyspora hir... 17000.0e+00
SFO79076.1 putative TIM-barrel protein, nifR3 family [Saccharopolyspora ant... 16990.0e+00
WP_010312592.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora spinosa... 16800.0e+00
SDX10684.1 putative TIM-barrel protein, nifR3 family [Saccharopolyspora sha... 16600.0e+00
WP_093264230.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora shandon... 16590.0e+00
WP_092525580.1 tRNA dihydrouridine synthase DusB [Actinopolyspora saharensi... 16350.0e+00
WP_037343101.1 tRNA dihydrouridine synthase DusB [Saccharopolyspora rectivi... 16260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear