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IDSACE_7199 TypeCDS
From8004503 nt length2583
To8001921 aa length860
GeneclpB pI4.87
Definitionputative Clp protease ATP-binding subunit M.W (Da)93551
Note AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4514 putative ATP-dependent Clp protease10840.0e+00
coelSCO3661 clpB putative ATP-dependent protease ATP-binding subunit10180.0e+00
sgrSGR_3426 putative ATP-dependent protease subunit11330.0e+00
scabSCAB42291 putative ATP-dependent Clp protease11490.0e+00
saceSCAB42291 putative ATP-dependent Clp protease11490.0e+00
nfarnfa54020 putative Clp protease ATP-binding subunit11220.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)598-759175.96.6e-52

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein766-84691.72.1e-26

Clp_N2Clp amino terminal domain, pathogenicity island component17-69, 96-14687.54.2e-25

AAA2ATPase family associated with various cellular activities (AAA)204-322, 604-73182.04.5e-23

AAA_51AAA domain (dynein-related subfamily)603-72058.56.2e-16

Sigma54_activat1Sigma-54 interaction domain601-72029.54.9e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009944536.1 ATP-dependent chaperone ClpB [Saccharopolyspora erythraea] >... 40040.0e+00
WP_093264006.1 ATP-dependent chaperone ClpB [Saccharopolyspora shandongensi... 36700.0e+00
WP_093358287.1 ATP-dependent chaperone ClpB [Saccharopolyspora jiangxiensis... 36670.0e+00
WP_093159072.1 ATP-dependent chaperone ClpB [Saccharopolyspora antimicrobic... 36620.0e+00
WP_010312796.1 ATP-dependent chaperone ClpB [Saccharopolyspora spinosa] 35830.0e+00
WP_093419872.1 ATP-dependent chaperone ClpB [Saccharopolyspora flava] >emb 35730.0e+00
WP_029721648.1 ATP-dependent chaperone ClpB [Saccharopolyspora rectivirgula... 35560.0e+00
WP_053731888.1 ATP-dependent chaperone ClpB [Nocardia sp. NRRL S-836] >gb 34630.0e+00
WP_065915650.1 ATP-dependent chaperone ClpB [Lentzea guizhouensis] >gb 34620.0e+00
WP_030465813.1 ATP-dependent chaperone ClpB [Lechevalieria aerocolonigenes] 34530.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear