ID	SAM23877_0517	Type	CDS
From	481134	nt length	846
To	481979	aa length	281
Gene	hasL	pI	4.72
Definition	RNA polymerase sigma factor	M.W (Da)	31485
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	227-275	63.0	1.2e-17
	Sigma70_r2	1	Sigma-70 region 2	58-128	59.9	1.4e-16
	Sigma70_r3	1	Sigma-70 region 3	138-200	50.5	1.5e-13
	Sigma70_r4_2	1	Sigma-70, region 4	226-273	36.0	3.8e-09
	KORA	1	TrfB plasmid transcriptional repressor	218-273	29.3	7.1e-07

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_053142075.1	RNA polymerase sigma factor SigF [Streptomyces ambofaciens] ...	1393	0.0e+00
WP_053141164.1	RNA polymerase sigma factor SigF [Streptomyces ambofaciens] ...	1357	0.0e+00
WP_121745371.1	RNA polymerase sigma factor SigF [Streptomyces sp. E2N166]	1350	0.0e+00
WP_210958335.1	RNA polymerase sigma factor SigF [Streptomyces sp. b94] >lcl...	1333	0.0e+00
WP_055421363.1	RNA polymerase sigma factor SigF [Streptomyces pactum] >gb	1328	0.0e+00
WP_043384055.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1327	0.0e+00
WP_191885225.1	RNA polymerase sigma factor SigF [Streptomyces mutabilis] >d...	1324	0.0e+00
WP_100047030.1	RNA polymerase sigma factor SigF [Streptomyces sp. Alain-F2R...	1322	0.0e+00
WP_217251237.1	SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy...	1321	0.0e+00
WP_087804629.1	RNA polymerase sigma factor SigF [Streptomyces sp. CS113] >g...	1320	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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