-- | --

IDSAM23877_0857 TypeCDS
From839118 nt length825
To838294 aa length274
Gene pI9.73
Definitionputative AraC-family transcriptional regulator M.W (Da) 29616
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_653 putative AraC-family transcriptional regulator3392.0e-119
coelSCO7351 putative AraC-family transcriptional regulator4172.0e-149
sgrSGR_4337 putative AraC-family transcriptional regulator3356.0e-117

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain186-26180.57.2e-23

AraC_binding1AraC-like ligand binding domain35-8723.63.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ53906.1 putative AraC-family transcriptional regulator [Streptomyces ambo... 12385.0e-171
WP_201258949.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 11845.8e-163
WP_053142137.1 helix-turn-helix transcriptional regulator [Streptomyces amb... 11551.3e-158
WP_223179374.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10407.2e-141
10371.0e-140
WP_217169237.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10293.1e-139
WP_189285176.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 10241.4e-138
WP_044378505.1 helix-turn-helix transcriptional regulator [Streptomyces cya... 10221.6e-138
GGL78131.1 AraC family transcriptional regulator [Streptomyces anthocyanicu... 10225.7e-138
WP_198653222.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10171.8e-137

PSORT result

LocalizationCertaintyPSORT said
Not Clear