-- | --

IDSAM23877_0896 TypeCDS
From884374 nt length870
To883505 aa length289
GenesigF pI6.01
DefinitionRNA polymerase sigma factor SigF M.W (Da) 32027
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7314 probable RNA polymerase sigma factor5090.0e+00

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 256-12464.84.2e-18

Sigma70_r41Sigma-70, region 4223-27062.91.3e-17

Sigma70_r4_21Sigma-70, region 4221-26839.92.2e-10

Sigma70_r31Sigma-70 region 3134-19233.23.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053126979.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 14160.0e+00
WP_217251586.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13240.0e+00
WP_087792373.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13190.0e+00
WP_061446322.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13170.0e+00
WP_212729231.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13170.0e+00
WP_134655713.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13140.0e+00
WP_164143664.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13140.0e+00
WP_109028940.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13130.0e+00
WP_153181273.1 SigB/SigF/SigG family RNA polymerase sigma factor [Streptomy... 13120.0e+00
WP_102927268.1 MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac... 13120.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear