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IDSAM23877_1004 TypeCDS
From995483 nt length1041
To996523 aa length346
Gene pI8.95
Definitionputative ABC transporter permease M.W (Da) 35646
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7418 putative simple sugar ABC transporter permease protein4701.0e-168
coelSCO0809 putative ABC transporter permease.4593.0e-164

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport system / permease component51-316138.42.1e-40

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ54053.1 putative ABC transporter permease [Streptomyces ambofaciens ATCC ... 12831.3e-175
WP_053127161.1 ABC transporter permease [Streptomyces ambofaciens] >emb 12664.4e-173
WP_063481331.1 ABC transporter permease [Streptomyces ambofaciens] >gb 12656.3e-173
WP_055420094.1 ABC transporter permease [Streptomyces pactum] >gb 12641.1e-172
WP_225631245.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12473.3e-170
WP_189233627.1 ABC transporter permease [Streptomyces flaveolus] >dbj 12421.9e-169
WP_188185465.1 ABC transporter permease [Streptomyces sp. TRM S81-3] >lcl 12334.5e-168
WP_121750877.1 ABC transporter permease [Streptomyces sp. E2N166] 12259.1e-167
WP_210961342.1 ABC transporter permease [Streptomyces sp. b94] >lcl 12241.2e-166
WP_005320674.1 ABC transporter permease [Streptomyces pristinaespiralis] >g... 11607.0e-157

PSORT result

LocalizationCertaintyPSORT said
Not Clear