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IDSAM23877_1108 TypeCDS
From1130923 nt length1989
To1128935 aa length662
Gene pI5.72
Definitionputative regulator of polyketide synthase expression M.W (Da) 70735
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1419 hypothetical protein9340.0e+00
coelSCO1011 hypothetical protein9970.0e+00
sgrSGR_1197 conserved hypothetical protein5021.0e-171

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain595-65367.08.6e-19

GAF_21GAF domain112-25562.25.6e-17

GAF1GAF domain113-25458.01.2e-15

GAF_31GAF domain113-25532.96.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ54157.1 putative regulator of polyketide synthase expression [Streptomyce... 24270.0e+00
WP_053127263.1 helix-turn-helix domain-containing protein [Streptomyces amb... 23900.0e+00
WP_219180516.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 22020.0e+00
WP_043375889.1 helix-turn-helix domain-containing protein [Streptomyces mut... 21700.0e+00
WP_191888624.1 helix-turn-helix domain-containing protein [Streptomyces mut... 21680.0e+00
WP_217250059.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 21670.0e+00
WP_185912763.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 21490.0e+00
WP_055420499.1 helix-turn-helix domain-containing protein [Streptomyces pac... 21350.0e+00
WP_185912258.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 21300.0e+00
WP_185930597.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 21250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear