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IDSAM23877_1193 TypeCDS
From1215877 nt length804
To1216680 aa length267
Gene pI7.37
Definitionputative secreted lyase M.W (Da) 27510
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6383 putative secreted pectate lyase3051.0e-105
coelSCO1110 putative secreted lyase4842.0e-176

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pectate_lyase1Pectate lyase39-239257.37.5e-77

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127414.1 pectate lyase [Streptomyces ambofaciens] >gb 12963.4e-180
PAK25398.1 pectate lyase [Streptomyces sp. alain-838] 11896.4e-164
WP_217144147.1 pectate lyase [Streptomyces sp. AC627_RSS907] 11898.1e-164
WP_188182248.1 pectate lyase [Streptomyces sp. TRM S81-3] >lcl 11889.4e-164
WP_122620774.1 pectate lyase [Streptomyces sp. Tu 4128] 11881.1e-163
WP_161332228.1 pectate lyase [Streptomyces sp. SID5789] >gb 11852.6e-163
WP_043375734.1 pectate lyase [Streptomyces mutabilis] >gb 11852.6e-163
WP_100047960.1 pectate lyase [Streptomyces sp. Alain-F2R5] >gb 11835.9e-163
WP_055420577.1 pectate lyase [Streptomyces pactum] >gb 11801.8e-162
WP_121750453.1 pectate lyase [Streptomyces sp. E2N166] 11792.7e-162

PSORT result

LocalizationCertaintyPSORT said
Not Clear