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IDSAM23877_1266 TypeCDS
From1296702 nt length837
To1297538 aa length278
Gene pI7.26
Definitionputative AraC family transcriptional regulator M.W (Da) 30092
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0471 putative araC family transcriptional regulator951.0e-23
sgrSGR_6687 putative AraC-family transcriptional regulator4402.0e-158

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain191-27069.22.4e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053127543.1 helix-turn-helix domain-containing protein [Streptomyces amb... 14130.0e+00
WP_071366043.1 helix-turn-helix domain-containing protein [Streptomyces col... 13180.0e+00
WP_150215321.1 helix-turn-helix domain-containing protein [Streptomyces ven... 13180.0e+00
WP_005321238.1 helix-turn-helix domain-containing protein [Streptomyces pri... 13130.0e+00
WP_189282302.1 helix-turn-helix domain-containing protein [Streptomyces atr... 13090.0e+00
WP_158993574.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13080.0e+00
WP_141296799.1 helix-turn-helix domain-containing protein [Streptomyces gar... 13070.0e+00
GEB57200.1 AraC family transcriptional regulator [Streptomyces gardneri] >d... 13070.0e+00
WP_030854035.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13060.0e+00
WP_030965904.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear